Genome Meta Information: Staphylococcus lugdunensis VCU150 (GCA_000649085.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000649085.1 | ||
| HOMD Taxon-ID | HMT-0128 | ||
| Species Name (in use by HOMD) | Staphylococcus lugdunensis | ||
| Organism Name (as deposited) | HMT-128 Staphylococcus lugdunensis VCU150 | ||
| Strain or Isolate | VCU150 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus lugdunensis |
||
| Sequencing Technology | 454 GS FLX Titanium | ||
| Genome Coverage | 30 | ||
| Contigs |
|
||
| Total Sequence Length | 2,536,050 (bp) | ||
| GC Percentage | 33.75 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/649/085/GCA_000649085.1_gslvcu150v01 | ||
| CDS | 2383 | ||
| Genes | 2530 | ||
| mRNA | 2530 | ||
| misc RNA | 84 | ||
| rRNA | 4 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.48 % | ||
| CheckM Completeness | 97.7 % | ||
| CheckM Contamination | 0.37 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | gslvcu150v01 |
| GenBank Assembly Accession | GCA_000649085.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000649085.1 [NCBI] |
| BioSample | SAMN00116873 [NCBI] |
| BioProject | PRJNA53783 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2010-10-29T12:02:16.340 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JIBS01 |
| NCBI TaxID | 904354 |
| Isolation Source | missing |
| Geo Location | missing |
