Taxon Table | Genome Table
Genome Meta Information:
Fusobacterium
necrophorum
DAB (GCA_000691705.1)
| HOMD Genome-ID |
GCA_000691705.1
|
| HOMD Taxon-ID |
HMT-0690
|
| Species Name (in use by HOMD) |
Fusobacterium necrophorum
|
| Organism Name (as deposited) |
HMT-690 Fusobacterium necrophorum DAB
|
| Strain or Isolate |
DAB
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium_C;
s__Fusobacterium_C necrophorum |
| Sequencing Technology |
Illumina MiSeq
|
| Genome Coverage |
17.92
|
| Contigs |
Number of Contigs: 254
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,520,035 (bp) |
| GC Percentage |
34.01
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/705/GCA_000691705.1_FnecDABv1.0
|
| CDS |
2223
|
| Genes |
2264
|
| mRNA |
2264
|
| misc RNA |
15
|
| rRNA |
3
|
| tRNA |
22
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
98.91 %
|
| CheckM Completeness |
96.47 %
|
| CheckM Contamination |
8.42 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
FnecDABv1.0
|
| GenBank Assembly Accession |
GCA_000691705.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000691705.1
[NCBI]
|
| BioSample |
SAMN02781283
[NCBI]
|
| BioProject |
PRJNA232680
[NCBI]
|
| Submitter |
Newport Laboratories, A Sanofi Company
|
| Submission Date |
2014-05-15T15:46:22.757
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JAAF01
|
| NCBI TaxID |
1441735
|
| Isolation Source |
jaw abscess
|
| Geo Location |
USA
|
