Taxon Table | Genome Table
Genome Meta Information:
Fusobacterium
necrophorum
DJ-2 (GCA_000691745.1)
| HOMD Genome-ID |
GCA_000691745.1
|
| HOMD Taxon-ID |
HMT-0690
|
| Species Name (in use by HOMD) |
Fusobacterium necrophorum
|
| Organism Name (as deposited) |
HMT-690 Fusobacterium necrophorum DJ-2
|
| Strain or Isolate |
DJ-2
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium_C;
s__Fusobacterium_C necrophorum |
| Sequencing Technology |
Illumina MiSeq
|
| Genome Coverage |
25.98
|
| Contigs |
Number of Contigs: 226
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,520,807 (bp) |
| GC Percentage |
33.96
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/691/745/GCA_000691745.1_FnecDJ-2v1.0
|
| CDS |
2235
|
| Genes |
2297
|
| mRNA |
2297
|
| misc RNA |
17
|
| rRNA |
4
|
| tRNA |
40
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
99.16 %
|
| CheckM Completeness |
95.25 %
|
| CheckM Contamination |
4.81 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
3 Contigs
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
FnecDJ-2v1.0
|
| GenBank Assembly Accession |
GCA_000691745.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_000691745.1
[NCBI]
|
| BioSample |
SAMN02781280
[NCBI]
|
| BioProject |
PRJNA232682
[NCBI]
|
| Submitter |
Newport Laboratories, A Sanofi company
|
| Submission Date |
2014-05-15T15:46:12.567
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JAAH01
|
| NCBI TaxID |
1441737
|
| Isolation Source |
jaw
|
| Geo Location |
USA
|
