Genome Meta Information: Hoylesella loescheii ATCC 15930 (GCA_000698925.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000698925.1 | ||
| HOMD Taxon-ID | HMT-0658 | ||
| Species Name (in use by HOMD) | Hoylesella loescheii | ||
| Organism Name (as deposited) | HMT-658 Hoylesella loescheii ATCC 15930 | ||
| Strain or Isolate | ATCC 15930 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella loescheii |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 115 | ||
| Contigs |
|
||
| Total Sequence Length | 3,475,052 (bp) | ||
| GC Percentage | 46.76 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/698/925/GCA_000698925.1_ASM69892v1 | ||
| CDS | 2766 | ||
| Genes | 2820 | ||
| mRNA | 2820 | ||
| misc RNA | 7 | ||
| rRNA | 3 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.98 % | ||
| CheckM Completeness | 99.66 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM69892v1 |
| GenBank Assembly Accession | GCA_000698925.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000698925.1 [NCBI] |
| BioSample | SAMN02840639 [NCBI] |
| BioProject | PRJNA198894 [NCBI] |
| Submitter | Washington University |
| Submission Date | 2014-06-05T18:19:05.600 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JNGW01 |
| NCBI TaxID | 1122985 |
| Isolation Source | oral cavity- mouth |
| Geo Location | |
