Genome Meta Information: Actinomyces israelii DSM 43320 (GCA_000711965.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000711965.1 | ||
| HOMD Taxon-ID | HMT-645 | ||
| Species Name (in use by HOMD) | Actinomyces israelii | ||
| Organism Name (as deposited) | HMT-645 Actinomyces israelii DSM 43320 | ||
| Strain or Isolate | DSM 43320 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces israelii |
||
| Sequencing Technology | Illumina HiSeq 2000 | ||
| Genome Coverage | |||
| Contigs |
|
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| Total Sequence Length | 4,025,772 (bp) | ||
| GC Percentage | 71.45 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/711/965/GCA_000711965.1_ASM71196v1 | ||
| CDS | 3303 | ||
| Genes | 3379 | ||
| mRNA | 3379 | ||
| misc RNA | 18 | ||
| rRNA | 1 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 1.78 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.84 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM71196v1 |
| GenBank Assembly Accession | GCA_000711965.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000711965.1 [NCBI] |
| BioSample | SAMN02745698 [NCBI] |
| BioProject | PRJNA215659 [NCBI] |
| Submitter | DOE Joint Genome Institute |
| Submission Date | 2014-05-06T01:38:43.280 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JONS01 |
| NCBI TaxID | 1120944 |
| Isolation Source | |
| Geo Location | USA: Rochester, MN |
