Genome Meta Information: Streptococcus mitis SK629 (GCA_000722695.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000722695.1 | ||
| HOMD Taxon-ID | HMT-0677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis SK629 | ||
| Strain or Isolate | SK629 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis_O |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 15 | ||
| Contigs |
|
||
| Total Sequence Length | 2,213,700 (bp) | ||
| GC Percentage | 39.42 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/695/GCA_000722695.1_ASM72269v1 | ||
| CDS | 2054 | ||
| Genes | 2222 | ||
| mRNA | 2222 | ||
| misc RNA | 100 | ||
| rRNA | 11 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.17 % | ||
| CheckM Completeness | 98.89 % | ||
| CheckM Contamination | 0.52 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM72269v1 |
| GenBank Assembly Accession | GCA_000722695.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000722695.1 [NCBI] |
| BioSample | SAMN02836936 [NCBI] |
| BioProject | PRJNA242570 [NCBI] |
| Submitter | Aarhus University |
| Submission Date | 2014-06-03T12:04:37.370 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JPFU01 |
| NCBI TaxID | 28037 |
| Isolation Source | buccal mucosa of child |
| Geo Location | Denmark: Aarhus |
