Genome Meta Information: Streptococcus mitis SK578 (GCA_000722755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000722755.1 | ||
| HOMD Taxon-ID | HMT-677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis SK578 | ||
| Strain or Isolate | SK578 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis_CM |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 15.0x | ||
| Contigs |
|
||
| Total Sequence Length | 2,080,791 (bp) | ||
| GC Percentage | 39.95 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/722/755/GCA_000722755.1_ASM72275v1 | ||
| CDS | 1954 | ||
| Genes | 2067 | ||
| mRNA | 2067 | ||
| misc RNA | 45 | ||
| rRNA | 11 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.2 % | ||
| CheckM Completeness | 99.53 % | ||
| CheckM Contamination | 0.83 % | ||
| CheckM2 Completeness | 99.98 % | ||
| CheckM2 Contamination | 0.58 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Streptococcus__mitis__HMT_677
(Interactive)
View SVG Image |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM72275v1 |
| GenBank Assembly Accession | GCA_000722755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000722755.1 [NCBI] |
| BioSample | SAMN02836940 [NCBI] |
| BioProject | PRJNA242567 [NCBI] |
| Submitter | Aarhus University |
| Submission Date | 2014-06-03T12:04:37.720 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JPFY01 |
| NCBI TaxID | 28037 |
| Isolation Source | blood |
| Geo Location | Switzerland: Lausanne |
