Genome Meta Information: Hominimerdicola aceti 80/3 (GCA_000723465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000723465.1 | ||
| HOMD Taxon-ID | HMT-0962 | ||
| Species Name (in use by HOMD) | Hominimerdicola aceti | ||
| Organism Name (as deposited) | HMT-962 Hominimerdicola aceti 80/3 | ||
| Strain or Isolate | 80/3 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Oscillospirales;f__Ruminococcaceae;g__Hominimerdicola; s__Hominimerdicola aceti |
||
| Sequencing Technology | |||
| Genome Coverage | 50 | ||
| Contigs |
|
||
| Total Sequence Length | 2,968,500 (bp) | ||
| GC Percentage | 42.62 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/723/465/GCA_000723465.1_Rb803 | ||
| CDS | 2745 | ||
| Genes | 2838 | ||
| mRNA | 2838 | ||
| misc RNA | 24 | ||
| rRNA | 12 | ||
| tRNA | 56 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 97.93 % | ||
| CheckM Contamination | 0.07 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Rb803 |
| GenBank Assembly Accession | GCA_000723465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000723465.1 [NCBI] |
| BioSample | SAMEA3139031 [NCBI] |
| BioProject | PRJEA88543 [NCBI] |
| Submitter | Institute of Food Research |
| Submission Date | 2014-11-21T08:59:26.563 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1160721 |
| Isolation Source | washed fiber of faecal sample |
| Geo Location | |
