Genome Meta Information: Haemophilus parainfluenzae ATCC 33392 (GCA_000746485.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000746485.1 | ||
| HOMD Taxon-ID | HMT-0718 | ||
| Species Name (in use by HOMD) | Haemophilus parainfluenzae | ||
| Organism Name (as deposited) | HMT-718 Haemophilus parainfluenzae ATCC 33392 | ||
| Strain or Isolate | ATCC 33392 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus_D; s__Haemophilus_D parainfluenzae |
||
| Sequencing Technology | 454 | ||
| Genome Coverage | 15 | ||
| Contigs |
|
||
| Total Sequence Length | 2,136,084 (bp) | ||
| GC Percentage | 39.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/746/485/GCA_000746485.1_ASM74648v1 | ||
| CDS | 2002 | ||
| Genes | 2126 | ||
| mRNA | 2126 | ||
| misc RNA | 55 | ||
| rRNA | 15 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.09 % | ||
| CheckM Contamination | 0.48 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM74648v1 |
| GenBank Assembly Accession | GCA_000746485.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000746485.1 [NCBI] |
| BioSample | SAMN00621707 [NCBI] |
| BioProject | PRJNA66117 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2011-05-26T16:55:02.853 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | AFQS01 |
| NCBI TaxID | 888828 |
| Isolation Source | skin, finger |
| Geo Location | |
