Genome Meta Information: Staphylococcus haemolyticus DNF00585 (GCA_000759125.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000759125.1 | ||
| HOMD Taxon-ID | HMT-0120 | ||
| Species Name (in use by HOMD) | Staphylococcus haemolyticus | ||
| Organism Name (as deposited) | HMT-120 Staphylococcus haemolyticus DNF00585 | ||
| Strain or Isolate | DNF00585 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus haemolyticus |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 73.5 | ||
| Contigs |
|
||
| Total Sequence Length | 2,357,406 (bp) | ||
| GC Percentage | 32.52 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/125/GCA_000759125.1_04_NF40_HMP2135v01 | ||
| CDS | 2334 | ||
| Genes | 2420 | ||
| mRNA | 2420 | ||
| misc RNA | 66 | ||
| rRNA | 2 | ||
| tRNA | 17 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.11 % | ||
| CheckM Completeness | 99.7 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 04_NF40_HMP2135v01 |
| GenBank Assembly Accession | GCA_000759125.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000759125.1 [NCBI] |
| BioSample | SAMN02850970 [NCBI] |
| BioProject | PRJNA219669 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2014-06-11T15:29:56.980 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JRNK01 |
| NCBI TaxID | 1401071 |
| Isolation Source | vagina |
| Geo Location | missing |
