Genome Meta Information: Hoylesella buccalis DNF00985 (GCA_000759265.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000759265.1 | ||
| HOMD Taxon-ID | HMT-0562 | ||
| Species Name (in use by HOMD) | Hoylesella buccalis | ||
| Organism Name (as deposited) | HMT-562 Hoylesella buccalis DNF00985 | ||
| Strain or Isolate | DNF00985 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Prevotella; s__Prevotella sp000479005 |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 78.87 | ||
| Contigs |
|
||
| Total Sequence Length | 2,756,480 (bp) | ||
| GC Percentage | 45.69 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/759/265/GCA_000759265.1_04_NF40_HMP2140v01 | ||
| CDS | 2298 | ||
| Genes | 2355 | ||
| mRNA | 2355 | ||
| misc RNA | 6 | ||
| rRNA | 3 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.59 % | ||
| CheckM Completeness | 99.22 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 04_NF40_HMP2140v01 |
| GenBank Assembly Accession | GCA_000759265.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000759265.1 [NCBI] |
| BioSample | SAMN02850977 [NCBI] |
| BioProject | PRJNA219677 [NCBI] |
| Submitter | J. Craig Venter Institute |
| Submission Date | 2014-06-11T15:29:57.653 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JRNP01 |
| NCBI TaxID | 1401078 |
| Isolation Source | vagina |
| Geo Location | missing |
