Genome Meta Information: Dermabacter hominis 1368 (GCA_000775415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000775415.1 | ||
| HOMD Taxon-ID | HMT-0354 | ||
| Species Name (in use by HOMD) | Dermabacter hominis | ||
| Organism Name (as deposited) | HMT-354 Dermabacter hominis 1368 | ||
| Strain or Isolate | 1368 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Dermabacteraceae;g__Dermabacter; s__Dermabacter hominis |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 193.13 | ||
| Contigs |
|
||
| Total Sequence Length | 2,510,630 (bp) | ||
| GC Percentage | 62.79 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/775/415/GCA_000775415.1_DHOM_v1 | ||
| CDS | 2250 | ||
| Genes | 2314 | ||
| mRNA | 2314 | ||
| misc RNA | 8 | ||
| rRNA | 6 | ||
| tRNA | 49 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.44 % | ||
| CheckM Completeness | 99.28 % | ||
| CheckM Contamination | 4.78 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | DHOM_v1 |
| GenBank Assembly Accession | GCA_000775415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000775415.1 [NCBI] |
| BioSample | SAMN02614628 [NCBI] |
| BioProject | PRJNA235370 [NCBI] |
| Submitter | Bielefeld University |
| Submission Date | 2014-01-31T15:58:15.220 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | JDRS01 |
| NCBI TaxID | 1450519 |
| Isolation Source | blood |
| Geo Location | Spain: Leon |
