Genome Meta Information: Streptococcus salivarius NCTC 8618 (GCA_000785515.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000785515.1 | ||
| HOMD Taxon-ID | HMT-0755 | ||
| Species Name (in use by HOMD) | Streptococcus salivarius | ||
| Organism Name (as deposited) | HMT-755 Streptococcus salivarius NCTC 8618 | ||
| Strain or Isolate | NCTC 8618 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus salivarius |
||
| Sequencing Technology | Sanger dideoxy sequencing; 454; IonTorrent | ||
| Genome Coverage | 26 | ||
| Contigs |
|
||
| Total Sequence Length | 2,188,923 (bp) | ||
| GC Percentage | 40.15 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/785/515/GCA_000785515.1_ASM78551v1 | ||
| CDS | 1992 | ||
| Genes | 2111 | ||
| mRNA | 2111 | ||
| misc RNA | 32 | ||
| rRNA | 18 | ||
| tRNA | 68 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 95.59 % | ||
| CheckM Contamination | 0.59 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM78551v1 |
| GenBank Assembly Accession | GCA_000785515.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000785515.1 [NCBI] |
| BioSample | SAMN03174835 [NCBI] |
| BioProject | PRJNA266841 [NCBI] |
| Submitter | University of Otago |
| Submission Date | 2014-11-10T17:27:34.003 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1304 |
| Isolation Source | Oral cavity |
| Geo Location | United Kingdom |
