Genome Meta Information: Corynebacterium minutissimum ATCC 23348 (GCA_000805675.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000805675.1 | ||
| HOMD Taxon-ID | HMT-0053 | ||
| Species Name (in use by HOMD) | Corynebacterium minutissimum | ||
| Organism Name (as deposited) | HMT-053 Corynebacterium minutissimum ATCC 23348 | ||
| Strain or Isolate | ATCC 23348 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium minutissimum |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 250 | ||
| Contigs |
|
||
| Total Sequence Length | 2,663,401 (bp) | ||
| GC Percentage | 59.96 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/805/675/GCA_000805675.1_ASM80567v1 | ||
| CDS | 2459 | ||
| Genes | 2524 | ||
| mRNA | 2524 | ||
| misc RNA | 8 | ||
| rRNA | 4 | ||
| tRNA | 51 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.84 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM80567v1 |
| GenBank Assembly Accession | GCA_000805675.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000805675.1 [NCBI] |
| BioSample | SAMN03140311 [NCBI] |
| BioProject | PRJNA264738 [NCBI] |
| Submitter | Centers for Disease Control & Prevention |
| Submission Date | 2014-10-23T14:23:05.156 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JSEF01 |
| NCBI TaxID | 38301 |
| Isolation Source | skin |
| Geo Location | United Kingdom: London |
