Genome Meta Information: Corynebacterium singulare IBS B52218 (GCA_000833575.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000833575.1 | ||
| HOMD Taxon-ID | HMT-0063 | ||
| Species Name (in use by HOMD) | Corynebacterium singulare | ||
| Organism Name (as deposited) | HMT-063 Corynebacterium singulare IBS B52218 | ||
| Strain or Isolate | IBS B52218 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium singulare |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 206.9 | ||
| Contigs |
|
||
| Total Sequence Length | 2,830,519 (bp) | ||
| GC Percentage | 60.12 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/833/575/GCA_000833575.1_ASM83357v1 | ||
| CDS | 2592 | ||
| Genes | 2665 | ||
| mRNA | 2665 | ||
| misc RNA | 7 | ||
| rRNA | 12 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.9 % | ||
| CheckM Contamination | 0.05 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM83357v1 |
| GenBank Assembly Accession | GCA_000833575.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000833575.1 [NCBI] |
| BioSample | SAMN03177398 [NCBI] |
| BioProject | PRJNA246651 [NCBI] |
| Submitter | Bielefeld University |
| Submission Date | 2014-11-12T18:52:49.760 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 161899 |
| Isolation Source | semen |
| Geo Location | France: Institute of Bacteriol |
