Genome Meta Information: Streptococcus mitis SK145 (GCA_000960065.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000960065.1 | ||
| HOMD Taxon-ID | HMT-677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis SK145 | ||
| Strain or Isolate | SK145 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis_DH |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 100.0x | ||
| Contigs |
|
||
| Total Sequence Length | 1,973,165 (bp) | ||
| GC Percentage | 40.0 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/960/065/GCA_000960065.1_ASM96006v1 | ||
| CDS | 1860 | ||
| Genes | 1978 | ||
| mRNA | 1978 | ||
| misc RNA | 46 | ||
| rRNA | 9 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.1 % | ||
| CheckM Completeness | 99.82 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.02 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Streptococcus__mitis__HMT_677
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM96006v1 |
| GenBank Assembly Accession | GCA_000960065.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000960065.1 [NCBI] |
| BioSample | SAMN03334902 [NCBI] |
| BioProject | PRJNA274768 [NCBI] |
| Submitter | University at Buffalo |
| Submission Date | 2015-02-09T16:38:46.263 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JYGS01 |
| NCBI TaxID | 28037 |
| Isolation Source | oral cavity |
| Geo Location | USA: New York, Buffalo |
