Genome Meta Information: Staphylococcus haemolyticus Sh29/312/L2 (GCA_000972725.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_000972725.1 | ||
| HOMD Taxon-ID | HMT-0120 | ||
| Species Name (in use by HOMD) | Staphylococcus haemolyticus | ||
| Organism Name (as deposited) | HMT-120 Staphylococcus haemolyticus Sh29/312/L2 | ||
| Strain or Isolate | Sh29/312/L2 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Staphylococcaceae;g__Staphylococcus; s__Staphylococcus haemolyticus |
||
| Sequencing Technology | Ion Torrent PGM platform | ||
| Genome Coverage | 160 | ||
| Contigs |
|
||
| Total Sequence Length | 2,561,368 (bp) | ||
| GC Percentage | 32.72 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/972/725/GCA_000972725.1_ASM97272v1 | ||
| CDS | 2500 | ||
| Genes | 2675 | ||
| mRNA | 2675 | ||
| misc RNA | 96 | ||
| rRNA | 16 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.33 % | ||
| CheckM Completeness | 95.39 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM97272v1 |
| GenBank Assembly Accession | GCA_000972725.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_000972725.1 [NCBI] |
| BioSample | SAMN03436301 [NCBI] |
| BioProject | PRJNA279309 [NCBI] |
| Submitter | USP |
| Submission Date | 2015-03-20T19:41:34.533 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1283 |
| Isolation Source | blood |
| Geo Location | Brazil: Sao Paulo |
