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Genome Meta Information:
Acidovorax
ebreus
J5-51 (GCA_001023515.1)
| HOMD Genome-ID |
GCA_001023515.1
|
| HOMD Taxon-ID |
HMT-209
|
| Species Name (in use by HOMD) |
Acidovorax ebreus
|
| Organism Name (as deposited) |
HMT-209 Acidovorax ebreus J5-51
|
| Strain or Isolate |
J5-51
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Diaphorobacter;
s__Diaphorobacter nitroreducens |
| Sequencing Technology |
Illumina GAIIx
|
| Genome Coverage |
160.0x
|
| Contigs |
Number of Contigs: 141
|
[Open
in Genome Viewer]
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Sequence]
[Linkout to
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|
|
| Total Sequence Length |
3,794,153 (bp) |
| GC Percentage |
66.21
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/023/515/GCA_001023515.1_ASM102351v1
|
| CDS |
3536
|
| Genes |
3739
|
| mRNA |
3739
|
| misc RNA |
153
|
| rRNA |
3
|
| tRNA |
46
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
94.28 %
|
| CheckM Contamination |
0.6 %
|
| CheckM2 Completeness |
92.79 %
|
| CheckM2 Contamination |
1.14 %
|
| CRISPR-cas |
2 Contigs
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ASM102351v1
|
| GenBank Assembly Accession |
GCA_001023515.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_001023515.1
[NCBI]
|
| BioSample |
SAMN03165360
[NCBI]
|
| BioProject |
PRJNA266489
[NCBI]
|
| Submitter |
Peking University
|
| Submission Date |
2014-11-06T03:59:04.510
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
JSYI01
|
| NCBI TaxID |
680496
|
| Isolation Source |
wastewater sludge
|
| Geo Location |
China: Shaoguan, Guangdong
|
