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Genome Meta Information:
Rothia mucilaginosa 328_RMUC (GCA_001064575.1)
| HOMD Genome-ID | GCA_001064575.1 |
| HOMD Taxon-ID |
HMT-681
|
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 328_RMUC |
| Strain or Isolate | 328_RMUC |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia sp001808955 |
| Sequencing Technology | Illumina HiSeq |
| Genome Coverage | 11.0x |
| Contigs |
Number of Contigs: 232
|
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|
| Total Sequence Length | 2,337,099 (bp) |
| GC Percentage | 59.53 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/064/575/GCA_001064575.1_ASM106457v1 |
| CDS | 1824 |
| Genes | 1881 |
| mRNA | 1881 |
| misc RNA | 12 |
| rRNA | 2 |
| tRNA | 42 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
View in Anvi`o: Rothia__mucilaginosa__HMT_147_681
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|
| Genome Assembly Name | ASM106457v1 |
| GenBank Assembly Accession |
GCA_001064575.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_001064575.1
[NCBI]
|
| BioSample |
SAMN03197517
[NCBI]
|
| BioProject |
PRJNA267549
[NCBI]
|
| Submitter | University of Washington |
| Submission Date | 2014-11-17T11:40:51.327 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | live |
| WGS Project |
JVLL01
|
| NCBI TaxID |
43675
|
| Isolation Source | missing |
| Geo Location | USA: WA |
| ANI (Average Nucluotide Identity) | 94.57 % |
| CheckM Completeness | 98.77 % |
| CheckM Percentile | 62.5 % |
| CheckM Contamination | 1.38 % |
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