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Genome Meta Information:
Rothia mucilaginosa 788_RMUC (GCA_001067345.1)
| HOMD Genome-ID | GCA_001067345.1 |
| HOMD Taxon-ID | HMT-681 |
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 788_RMUC |
| Strain or Isolate | 788_RMUC |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia sp001808955 |
| Sequencing Technology | Illumina HiSeq |
| Genome Coverage | 19.0x |
| Contigs |
Number of Contigs: 237
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| Total Sequence Length | 2,257,570 (bp) |
| GC Percentage | 59.64 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/345/GCA_001067345.1_ASM106734v1 |
| CDS | 1763 |
| Genes | 1817 |
| mRNA | 1817 |
| misc RNA | 13 |
| rRNA | 2 |
| tRNA | 38 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
Rothia__mucilaginosa__HMT_147_681
Open SVG
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| Genome Assembly Name | ASM106734v1 |
| GenBank Assembly Accession |
GCA_001067345.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_001067345.1
[NCBI]
|
| BioSample |
SAMN03197999
[NCBI]
|
| BioProject |
PRJNA267549
[NCBI]
|
| Submitter | University of Washington |
| Submission Date | 2014-11-17T11:41:36.393 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project | JUSX01 |
| NCBI TaxID | 43675 |
| Isolation Source | missing |
| Geo Location | USA: WA |
| ANI (Average Nucluotide Identity) | 94.22 % |
| CheckM Completeness | 98.01 % |
| CheckM Percentile | 40.833332 % |
| CheckM Contamination | 1.86 % |
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