Genome Meta Information: Rothia mucilaginosa 902_RMUC (GCA_001067855.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001067855.1 | ||
| HOMD Taxon-ID | HMT-681 | ||
| Species Name (in use by HOMD) | Rothia mucilaginosa | ||
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 902_RMUC | ||
| Strain or Isolate | 902_RMUC | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia; s__Rothia sp001808955 |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 39.0x | ||
| Contigs |
|
||
| Total Sequence Length | 2,264,347 (bp) | ||
| GC Percentage | 59.63 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/067/855/GCA_001067855.1_ASM106785v1 | ||
| CDS | 1736 | ||
| Genes | 1794 | ||
| mRNA | 1794 | ||
| misc RNA | 13 | ||
| rRNA | 5 | ||
| tRNA | 39 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 94.14 % | ||
| CheckM Completeness | 99.33 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.01 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM106785v1 |
| GenBank Assembly Accession | GCA_001067855.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001067855.1 [NCBI] |
| BioSample | SAMN03198110 [NCBI] |
| BioProject | PRJNA267549 [NCBI] |
| Submitter | University of Washington |
| Submission Date | 2014-11-17T11:41:43.463 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | JUOQ01 |
| NCBI TaxID | 43675 |
| Isolation Source | missing |
| Geo Location | USA: WA |
