Genome Meta Information: Campylobacter gracilis ATCC 33236 (GCA_001190745.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001190745.1 | ||
| HOMD Taxon-ID | HMT-0623 | ||
| Species Name (in use by HOMD) | Campylobacter gracilis | ||
| Organism Name (as deposited) | HMT-623 Campylobacter gracilis ATCC 33236 | ||
| Strain or Isolate | ATCC 33236 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_B; s__Campylobacter_B gracilis |
||
| Sequencing Technology | Sanger dideoxy sequencing; 454; Illumina | ||
| Genome Coverage | 689 | ||
| Contigs |
|
||
| Total Sequence Length | 2,281,652 (bp) | ||
| GC Percentage | 46.56 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/745/GCA_001190745.1_ASM119074v1 | ||
| CDS | 2133 | ||
| Genes | 2187 | ||
| mRNA | 2187 | ||
| misc RNA | 4 | ||
| rRNA | 6 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 95.39 % | ||
| CheckM Contamination | 1.22 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM119074v1 |
| GenBank Assembly Accession | GCA_001190745.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001190745.1 [NCBI] |
| BioSample | SAMN03862076 [NCBI] |
| BioProject | PRJNA290037 [NCBI] |
| Submitter | USDA, ARS, WRRC |
| Submission Date | 2015-07-15T15:45:11.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 824 |
| Isolation Source | oral |
| Geo Location | USA |
