Genome Meta Information: Campylobacter ureolyticus RIGS 9880 (GCA_001190755.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001190755.1 | ||
| HOMD Taxon-ID | HMT-0842 | ||
| Species Name (in use by HOMD) | Campylobacter ureolyticus | ||
| Organism Name (as deposited) | HMT-842 Campylobacter ureolyticus RIGS 9880 | ||
| Strain or Isolate | RIGS 9880 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_B; s__Campylobacter_B ureolyticus_B |
||
| Sequencing Technology | Sanger dideoxy sequencing; 454; Illumina; PacBio | ||
| Genome Coverage | 1841 | ||
| Contigs |
|
||
| Total Sequence Length | 1,641,887 (bp) | ||
| GC Percentage | 29.23 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/190/755/GCA_001190755.1_ASM119075v1 | ||
| CDS | 1654 | ||
| Genes | 1710 | ||
| mRNA | 1710 | ||
| misc RNA | 5 | ||
| rRNA | 6 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.78 % | ||
| CheckM Completeness | 97.99 % | ||
| CheckM Contamination | 1.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM119075v1 |
| GenBank Assembly Accession | GCA_001190755.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001190755.1 [NCBI] |
| BioSample | SAMN03737995 [NCBI] |
| BioProject | PRJNA66811 [NCBI] |
| Submitter | USDA, ARS, WRRC |
| Submission Date | 2015-05-27T17:03:40.983 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1032069 |
| Isolation Source | |
| Geo Location | Denmark |
