Genome Meta Information: Kocuria palustris MU14/1 (GCA_001275345.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001275345.1 | ||
| HOMD Taxon-ID | HMT-0084 | ||
| Species Name (in use by HOMD) | Kocuria palustris | ||
| Organism Name (as deposited) | HMT-084 Kocuria palustris MU14/1 | ||
| Strain or Isolate | MU14/1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Kocuria; s__Kocuria palustris |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,854,447 (bp) | ||
| GC Percentage | 70.5 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/275/345/GCA_001275345.1_ASM127534v1 | ||
| CDS | 2477 | ||
| Genes | 2560 | ||
| mRNA | 2560 | ||
| misc RNA | 25 | ||
| rRNA | 9 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.36 % | ||
| CheckM Completeness | 98.56 % | ||
| CheckM Contamination | 1.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM127534v1 |
| GenBank Assembly Accession | GCA_001275345.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001275345.1 [NCBI] |
| BioSample | SAMN04012814 [NCBI] |
| BioProject | PRJNA293988 [NCBI] |
| Submitter | University of Missouri - Columbia |
| Submission Date | 2015-08-26T14:26:25.267 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 71999 |
| Isolation Source | culture contaminant |
| Geo Location | USA: Missouri, Columbia |
