Genome Meta Information: Streptococcus pseudopneumoniae SMRU856 (GCA_001337855.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001337855.1 | ||
| HOMD Taxon-ID | HMT-0425 | ||
| Species Name (in use by HOMD) | Streptococcus pseudopneumoniae | ||
| Organism Name (as deposited) | HMT-425 Streptococcus pseudopneumoniae SMRU856 | ||
| Strain or Isolate | SMRU856 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus pseudopneumoniae |
||
| Sequencing Technology | SLX | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,162,506 (bp) | ||
| GC Percentage | 39.7 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/337/855/GCA_001337855.1_6775_2_16 | ||
| CDS | 2092 | ||
| Genes | 2199 | ||
| mRNA | 2199 | ||
| misc RNA | 64 | ||
| rRNA | 4 | ||
| tRNA | 38 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.52 % | ||
| CheckM Completeness | 96.71 % | ||
| CheckM Contamination | 1.76 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 6775_2#16 |
| GenBank Assembly Accession | GCA_001337855.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001337855.1 [NCBI] |
| BioSample | SAMEA1024695 [NCBI] |
| BioProject | PRJEB2393 [NCBI] |
| Submitter | SC |
| Submission Date | 2012-01-20T19:51:52.043 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CHTX01 |
| NCBI TaxID | 257758 |
| Isolation Source | nasopharynx |
| Geo Location | Thailand: Maela |
