Genome Meta Information: Streptococcus constellatus FDAARGOS_146 (GCA_001471735.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001471735.2 | ||
| HOMD Taxon-ID | HMT-0576 | ||
| Species Name (in use by HOMD) | Streptococcus constellatus | ||
| Organism Name (as deposited) | HMT-576 Streptococcus constellatus FDAARGOS_146 | ||
| Strain or Isolate | FDAARGOS_146 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus constellatus |
||
| Sequencing Technology | PacBio; Illumina | ||
| Genome Coverage | 1058 | ||
| Contigs |
|
||
| Total Sequence Length | 1,930,245 (bp) | ||
| GC Percentage | 38.09 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/471/735/GCA_001471735.2_ASM147173v2 | ||
| CDS | 1821 | ||
| Genes | 1933 | ||
| mRNA | 1933 | ||
| misc RNA | 39 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.49 % | ||
| CheckM Contamination | 0.58 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM147173v2 |
| GenBank Assembly Accession | GCA_001471735.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001471735.2 [NCBI] |
| BioSample | SAMN03996291 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center |
| Submission Date | 2015-08-17T07:15:16.000 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | LOSA02 |
| NCBI TaxID | 1702171 |
| Isolation Source | vaginal swab |
| Geo Location | USA: DC |
