Genome Meta Information: Fusobacterium nucleatum_sensu_stricto ChDC F311 (GCA_001510735.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001510735.1 | ||
| HOMD Taxon-ID | HMT-0698 | ||
| Species Name (in use by HOMD) | Fusobacterium nucleatum_sensu_stricto | ||
| Organism Name (as deposited) | HMT-698 Fusobacterium nucleatum_sensu_stricto ChDC F311 | ||
| Strain or Isolate | ChDC F311 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium nucleatum |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 1331 | ||
| Contigs |
|
||
| Total Sequence Length | 2,470,675 (bp) | ||
| GC Percentage | 27.08 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/510/735/GCA_001510735.1_ASM151073v1 | ||
| CDS | 2406 | ||
| Genes | 2473 | ||
| mRNA | 2473 | ||
| misc RNA | 18 | ||
| rRNA | 12 | ||
| tRNA | 36 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.91 % | ||
| CheckM Completeness | 98.76 % | ||
| CheckM Contamination | 2.01 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM151073v1 |
| GenBank Assembly Accession | GCA_001510735.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001510735.1 [NCBI] |
| BioSample | SAMN03263580 [NCBI] |
| BioProject | PRJNA270147 [NCBI] |
| Submitter | Chosun University |
| Submission Date | 2014-12-12T00:32:48.436 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LMVH01 |
| NCBI TaxID | 76856 |
| Isolation Source | subgingival dental plaque |
| Geo Location | South Korea: Gwangju |
