Genome Meta Information: Streptococcus thermophilus S9 (GCA_001514435.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001514435.1 | ||
| HOMD Taxon-ID | HMT-0152 | ||
| Species Name (in use by HOMD) | Streptococcus thermophilus | ||
| Organism Name (as deposited) | HMT-152 Streptococcus thermophilus S9 | ||
| Strain or Isolate | S9 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus thermophilus |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 393.538 | ||
| Contigs |
|
||
| Total Sequence Length | 1,787,436 (bp) | ||
| GC Percentage | 39.1 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/514/435/GCA_001514435.1_ASM151443v1 | ||
| CDS | 1876 | ||
| Genes | 2012 | ||
| mRNA | 2012 | ||
| misc RNA | 50 | ||
| rRNA | 18 | ||
| tRNA | 67 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.61 % | ||
| CheckM Completeness | 96.18 % | ||
| CheckM Contamination | 0.74 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM151443v1 |
| GenBank Assembly Accession | GCA_001514435.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001514435.1 [NCBI] |
| BioSample | SAMN04384202 [NCBI] |
| BioProject | PRJNA307645 [NCBI] |
| Submitter | China Agricultural University |
| Submission Date | 2016-01-05T07:35:02.580 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1308 |
| Isolation Source | traditional dairy |
| Geo Location | China |
