Genome Meta Information: Anaerococcus tetradius MJR8151 (GCA_001546165.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001546165.1 | ||
| HOMD Taxon-ID | HMT-788 | ||
| Species Name (in use by HOMD) | Anaerococcus tetradius | ||
| Organism Name (as deposited) | HMT-788 Anaerococcus tetradius MJR8151 | ||
| Strain or Isolate | MJR8151 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Tissierellales;f__Peptoniphilaceae;g__Anaerococcus; s__Anaerococcus tetradius |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 103.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,015,538 (bp) | ||
| GC Percentage | 34.54 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/546/165/GCA_001546165.1_ASM154616v1 | ||
| CDS | 1833 | ||
| Genes | 1900 | ||
| mRNA | 1900 | ||
| misc RNA | 31 | ||
| rRNA | 2 | ||
| tRNA | 33 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.31 % | ||
| CheckM Completeness | 99.39 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 98.34 % | ||
| CheckM2 Contamination | 0.25 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM154616v1 |
| GenBank Assembly Accession | GCA_001546165.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001546165.1 [NCBI] |
| BioSample | SAMN03842091 [NCBI] |
| BioProject | PRJNA272092 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2015-07-07T13:05:05.973 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LRPM01 |
| NCBI TaxID | 33036 |
| Isolation Source | Vagina |
| Geo Location | |
