Genome Meta Information: Streptococcus pyogenes MTB314 (GCA_001547835.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001547835.1 | ||
| HOMD Taxon-ID | HMT-0745 | ||
| Species Name (in use by HOMD) | Streptococcus pyogenes | ||
| Organism Name (as deposited) | HMT-745 Streptococcus pyogenes MTB314 | ||
| Strain or Isolate | MTB314 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus pyogenes |
||
| Sequencing Technology | 454 GS Jr; ABI 3730 | ||
| Genome Coverage | 40 | ||
| Contigs |
|
||
| Total Sequence Length | 1,744,827 (bp) | ||
| GC Percentage | 38.51 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/547/835/GCA_001547835.1_ASM154783v1 | ||
| CDS | 1656 | ||
| Genes | 1793 | ||
| mRNA | 1793 | ||
| misc RNA | 51 | ||
| rRNA | 18 | ||
| tRNA | 67 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.92 % | ||
| CheckM Completeness | 97.09 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM154783v1 |
| GenBank Assembly Accession | GCA_001547835.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001547835.1 [NCBI] |
| BioSample | SAMD00000332 [NCBI] |
| BioProject | PRJDB1668 [NCBI] |
| Submitter | Kitasato Institute of Life Sciences |
| Submission Date | 2015-09-16T16:21:04.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1314 |
| Isolation Source | |
| Geo Location | Japan: Hikone-shi |
