Genome Meta Information: Lachnoanaerobaculum orale DNF00896 (GCA_001552975.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001552975.1 | ||
| HOMD Taxon-ID | HMT-0082 | ||
| Species Name (in use by HOMD) | Lachnoanaerobaculum orale | ||
| Organism Name (as deposited) | HMT-082 Lachnoanaerobaculum orale DNF00896 | ||
| Strain or Isolate | DNF00896 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Lachnoanaerobaculum; s__Lachnoanaerobaculum orale |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 90 | ||
| Contigs |
|
||
| Total Sequence Length | 2,919,224 (bp) | ||
| GC Percentage | 37.73 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/552/975/GCA_001552975.1_ASM155297v1 | ||
| CDS | 2706 | ||
| Genes | 2768 | ||
| mRNA | 2768 | ||
| misc RNA | 15 | ||
| rRNA | 2 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 87.16 % | ||
| CheckM Completeness | 81.9 % | ||
| CheckM Contamination | 8.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM155297v1 |
| GenBank Assembly Accession | GCA_001552975.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001552975.1 [NCBI] |
| BioSample | SAMN04108634 [NCBI] |
| BioProject | PRJNA246510 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2015-09-23T16:10:49.080 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LSDA01 |
| NCBI TaxID | 467210 |
| Isolation Source | vagina |
| Geo Location | |
