Genome Meta Information: Gemella haemolysans DNF01167 (GCA_001553035.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001553035.1 | ||
| HOMD Taxon-ID | HMT-0626 | ||
| Species Name (in use by HOMD) | Gemella haemolysans | ||
| Organism Name (as deposited) | HMT-626 Gemella haemolysans clade-626 DNF01167 | ||
| Strain or Isolate | DNF01167 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Staphylococcales;f__Gemellaceae;g__Gemella; s__Gemella haemolysans_B |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 132 | ||
| Contigs |
|
||
| Total Sequence Length | 1,892,523 (bp) | ||
| GC Percentage | 30.85 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/553/035/GCA_001553035.1_ASM155303v1 | ||
| CDS | 1701 | ||
| Genes | 1769 | ||
| mRNA | 0 | ||
| misc RNA | 35 | ||
| rRNA | 3 | ||
| tRNA | 29 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.9 % | ||
| CheckM Completeness | 94.26 % | ||
| CheckM Contamination | 3.99 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM155303v1 |
| GenBank Assembly Accession | GCA_001553035.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001553035.1 [NCBI] |
| BioSample | SAMN03851017 [NCBI] |
| BioProject | PRJNA272078 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2015-07-08T17:05:52.163 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LSDC01 |
| NCBI TaxID | 1379 |
| Isolation Source | vagina |
| Geo Location | |
