Genome Meta Information: Enterococcus casseliflavus FDAARGOS_163 (GCA_001558875.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001558875.2 | ||
| HOMD Taxon-ID | HMT-0801 | ||
| Species Name (in use by HOMD) | Enterococcus casseliflavus | ||
| Organism Name (as deposited) | HMT-801 Enterococcus casseliflavus FDAARGOS_163 | ||
| Strain or Isolate | FDAARGOS_163 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__Enterococcus_D; s__Enterococcus_D entomosocium |
||
| Sequencing Technology | PacBio; Illumina | ||
| Genome Coverage | 336.564 | ||
| Contigs |
|
||
| Total Sequence Length | 3,821,476 (bp) | ||
| GC Percentage | 42.33 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/558/875/GCA_001558875.2_ASM155887v2 | ||
| CDS | 3493 | ||
| Genes | 3628 | ||
| mRNA | 3628 | ||
| misc RNA | 58 | ||
| rRNA | 15 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 82.89 % | ||
| CheckM Completeness | 85.59 % | ||
| CheckM Contamination | 13.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM155887v2 |
| GenBank Assembly Accession | GCA_001558875.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001558875.2 [NCBI] |
| BioSample | SAMN03996308 [NCBI] |
| BioProject | PRJNA231221 [NCBI] |
| Submitter | University of Maryland School of Medicine Institute for Genome Sciences (IGS) - sequencing center |
| Submission Date | 2015-08-17T07:15:17.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1353 |
| Isolation Source | elbow swab |
| Geo Location | USA:DC |
