Genome Meta Information: Streptococcus mitis SVGS_061 (GCA_001560895.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001560895.1 | ||
| HOMD Taxon-ID | HMT-677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis SVGS_061 | ||
| Strain or Isolate | SVGS_061 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis_Q |
||
| Sequencing Technology | PacBio/Illumina | ||
| Genome Coverage | 151.0x | ||
| Contigs |
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| Total Sequence Length | 2,167,922 (bp) | ||
| GC Percentage | 39.97 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/560/895/GCA_001560895.1_ASM156089v1 | ||
| CDS | 1937 | ||
| Genes | 2073 | ||
| mRNA | 2073 | ||
| misc RNA | 64 | ||
| rRNA | 12 | ||
| tRNA | 59 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 93.01 % | ||
| CheckM Completeness | 99.82 % | ||
| CheckM Contamination | 0.2 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.07 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Streptococcus__mitis__HMT_677
(Interactive)
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM156089v1 |
| GenBank Assembly Accession | GCA_001560895.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001560895.1 [NCBI] |
| BioSample | SAMN04461788 [NCBI] |
| BioProject | PRJNA311086 [NCBI] |
| Submitter | MD Anderson |
| Submission Date | 2016-02-05T17:52:02.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28037 |
| Isolation Source | blood |
| Geo Location | USA: Houston, Texas, MD Anders |
