Genome Meta Information: Fannyhessea vaginae CMW7778A (GCA_001562845.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001562845.1 | ||
| HOMD Taxon-ID | HMT-0814 | ||
| Species Name (in use by HOMD) | Fannyhessea vaginae | ||
| Organism Name (as deposited) | HMT-814 Fannyhessea vaginae CMW7778A | ||
| Strain or Isolate | CMW7778A | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Coriobacteriia;o__Coriobacteriales;f__Atopobiaceae;g__Fannyhessea; s__Fannyhessea vaginae |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 93 | ||
| Contigs |
|
||
| Total Sequence Length | 1,504,164 (bp) | ||
| GC Percentage | 42.72 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/562/845/GCA_001562845.1_ASM156284v1 | ||
| CDS | 1241 | ||
| Genes | 1301 | ||
| mRNA | 1301 | ||
| misc RNA | 10 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.34 % | ||
| CheckM Completeness | 96.75 % | ||
| CheckM Contamination | 2.54 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM156284v1 |
| GenBank Assembly Accession | GCA_001562845.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001562845.1 [NCBI] |
| BioSample | SAMN03842164 [NCBI] |
| BioProject | PRJNA272124 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2015-07-07T14:05:04.673 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LSOA01 |
| NCBI TaxID | 82135 |
| Isolation Source | vagina |
| Geo Location | |
