Genome Meta Information: Corynebacterium simulans PES1 (GCA_001586215.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001586215.1 | ||
| HOMD Taxon-ID | HMT-0062 | ||
| Species Name (in use by HOMD) | Corynebacterium simulans | ||
| Organism Name (as deposited) | HMT-062 Corynebacterium simulans PES1 | ||
| Strain or Isolate | PES1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium simulans |
||
| Sequencing Technology | PacBio RSII | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,737,971 (bp) | ||
| GC Percentage | 59.01 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/586/215/GCA_001586215.1_ASM158621v1 | ||
| CDS | 2554 | ||
| Genes | 2626 | ||
| mRNA | 2626 | ||
| misc RNA | 7 | ||
| rRNA | 12 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.53 % | ||
| CheckM Completeness | 99.69 % | ||
| CheckM Contamination | 0.54 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM158621v1 |
| GenBank Assembly Accession | GCA_001586215.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001586215.1 [NCBI] |
| BioSample | SAMN03455925 [NCBI] |
| BioProject | PRJNA279606 [NCBI] |
| Submitter | NHGRI |
| Submission Date | 2015-04-01T11:39:04.000 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 146827 |
| Isolation Source | |
| Geo Location | USA |
