Genome Meta Information: Streptococcus australis A12 (GCA_001587175.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001587175.1 | ||
| HOMD Taxon-ID | HMT-0073 | ||
| Species Name (in use by HOMD) | Streptococcus australis | ||
| Organism Name (as deposited) | HMT-073 Streptococcus australis A12 | ||
| Strain or Isolate | A12 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus xiaochunlingii |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 1,874,337 (bp) | ||
| GC Percentage | 42.21 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/587/175/GCA_001587175.1_ASM158717v1 | ||
| CDS | 1769 | ||
| Genes | 1890 | ||
| mRNA | 1890 | ||
| misc RNA | 47 | ||
| rRNA | 12 | ||
| tRNA | 61 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM158717v1 |
| GenBank Assembly Accession | GCA_001587175.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001587175.1 [NCBI] |
| BioSample | SAMN04287214 [NCBI] |
| BioProject | PRJNA302800 [NCBI] |
| Submitter | University of Florida |
| Submission Date | 2015-11-23T11:17:05.217 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1759399 |
| Isolation Source | supragingival plaque from caries-free child |
| Geo Location | USA: Florida |
