Genome Meta Information: Arachnia propionica NBRC 14587 (GCA_001592325.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001592325.1 | ||
| HOMD Taxon-ID | HMT-739 | ||
| Species Name (in use by HOMD) | Arachnia propionica | ||
| Organism Name (as deposited) | HMT-739 Arachnia propionica NBRC 14587 | ||
| Strain or Isolate | NBRC 14587 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Propionibacteriales;f__Propionibacteriaceae;g__Arachnia; s__Arachnia propionica |
||
| Sequencing Technology | 454 GS-FLX Titanium; Illumina HiSeq 1000 | ||
| Genome Coverage | 190.0x | ||
| Contigs |
|
||
| Total Sequence Length | 3,385,209 (bp) | ||
| GC Percentage | 66.15 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/592/325/GCA_001592325.1_ASM159232v1 | ||
| CDS | 2997 | ||
| Genes | 3075 | ||
| mRNA | 3075 | ||
| misc RNA | 22 | ||
| rRNA | 3 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.47 % | ||
| CheckM Contamination | 1.75 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.6 % | ||
| CRISPR-cas | 3 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM159232v1 |
| GenBank Assembly Accession | GCA_001592325.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001592325.1 [NCBI] |
| BioSample | SAMD00047213 [NCBI] |
| BioProject | PRJDB282 [NCBI] |
| Submitter | National Institute of Technology and Evaluation |
| Submission Date | 2016-02-24T01:00:24.000 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | BCWS01 |
| NCBI TaxID | 1218109 |
| Isolation Source | |
| Geo Location | missing |
