Genome Meta Information: Dietzia cinnamea DSM 43672 (GCA_001630765.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001630765.1 | ||
| HOMD Taxon-ID | HMT-0368 | ||
| Species Name (in use by HOMD) | Dietzia cinnamea | ||
| Organism Name (as deposited) | HMT-368 Dietzia cinnamea DSM 43672 | ||
| Strain or Isolate | DSM 43672 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Dietzia; s__Dietzia cinnamea |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 1 | ||
| Contigs |
|
||
| Total Sequence Length | 3,505,372 (bp) | ||
| GC Percentage | 70.86 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/630/765/GCA_001630765.1_scaffolds | ||
| CDS | 3264 | ||
| Genes | 3350 | ||
| mRNA | 3350 | ||
| misc RNA | 20 | ||
| rRNA | 7 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 86.82 % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | scaffolds |
| GenBank Assembly Accession | GCA_001630765.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001630765.1 [NCBI] |
| BioSample | SAMN04543680 [NCBI] |
| BioProject | PRJNA315745 [NCBI] |
| Submitter | Jacobs University |
| Submission Date | 2016-03-09T14:21:02.000 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | LVFF01 |
| NCBI TaxID | 37915 |
| Isolation Source | soil |
| Geo Location | Germany |
