Genome Meta Information: Selenomonas sp. HMT-126 W7667 (GCA_001683335.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001683335.1 | ||
| HOMD Taxon-ID | HMT-0126 | ||
| Species Name (in use by HOMD) | Selenomonas sp. HMT-126 | ||
| Organism Name (as deposited) | HMT-126 Selenomonas sp. HMT-126 W7667 | ||
| Strain or Isolate | W7667 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Selenomonadales;f__Selenomonadaceae;g__Centipeda; s__Centipeda sp001683335 |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 34 | ||
| Contigs |
|
||
| Total Sequence Length | 2,886,041 (bp) | ||
| GC Percentage | 57.64 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/683/335/GCA_001683335.1_ASM168333v1 | ||
| CDS | 2625 | ||
| Genes | 2725 | ||
| mRNA | 2725 | ||
| misc RNA | 32 | ||
| rRNA | 12 | ||
| tRNA | 56 | ||
| tmRNA | 0 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.12 % | ||
| CheckM Contamination | 1.47 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | No Pangenomes Available. | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM168333v1 |
| GenBank Assembly Accession | GCA_001683335.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001683335.1 [NCBI] |
| BioSample | SAMN03897727 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2015-07-23T20:18:24.000 |
| Assembly Method | |
| Assembly Level | Chromosome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 712528 |
| Isolation Source | Subgingival plaque |
| Geo Location | United Kingdom: London |
