Genome Meta Information: Tannerella serpentiformis W11667 (GCA_001717525.2)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001717525.2 | ||
| HOMD Taxon-ID | HMT-0286 | ||
| Species Name (in use by HOMD) | Tannerella serpentiformis | ||
| Organism Name (as deposited) | HMT-286 Tannerella serpentiformis W11667 | ||
| Strain or Isolate | W11667 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Tannerellaceae;g__Tannerella; s__Tannerella serpentiformis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 254 | ||
| Contigs |
|
||
| Total Sequence Length | 2,973,544 (bp) | ||
| GC Percentage | 56.45 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/717/525/GCA_001717525.2_ASM171752v2 | ||
| CDS | 2483 | ||
| Genes | 2558 | ||
| mRNA | 2558 | ||
| misc RNA | 22 | ||
| rRNA | 6 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 86.04 % | ||
| CheckM Contamination | 4.98 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM171752v2 |
| GenBank Assembly Accession | GCA_001717525.2 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001717525.2 [NCBI] |
| BioSample | SAMN05413928 [NCBI] |
| BioProject | PRJNA282954 [NCBI] |
| Submitter | The Forsyth Institute |
| Submission Date | 2016-07-18T13:01:08.560 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 712710 |
| Isolation Source | subgingival dental plaque |
| Geo Location | United Kingdom: London |
