Genome Meta Information: Streptococcus gordonii HMSC10A01 (GCA_001807785.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001807785.1 | ||
| HOMD Taxon-ID | HMT-0622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii HMSC10A01 | ||
| Strain or Isolate | HMSC10A01 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 315 | ||
| Contigs |
|
||
| Total Sequence Length | 2,170,492 (bp) | ||
| GC Percentage | 40.65 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/807/785/GCA_001807785.1_ASM180778v1 | ||
| CDS | 2059 | ||
| Genes | 2120 | ||
| mRNA | 2120 | ||
| misc RNA | 25 | ||
| rRNA | 3 | ||
| tRNA | 32 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.36 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM180778v1 |
| GenBank Assembly Accession | GCA_001807785.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001807785.1 [NCBI] |
| BioSample | SAMN03287006 [NCBI] |
| BioProject | PRJNA269845 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2015-01-16T11:05:07.833 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LTZV01 |
| NCBI TaxID | 1581076 |
| Isolation Source | stool |
| Geo Location | |
