Genome Meta Information: Fusobacterium vincentii HMSC064B12 (GCA_001810995.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001810995.1 | ||
| HOMD Taxon-ID | HMT-0200 | ||
| Species Name (in use by HOMD) | Fusobacterium vincentii | ||
| Organism Name (as deposited) | HMT-200 Fusobacterium vincentii HMSC064B12 | ||
| Strain or Isolate | HMSC064B12 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium vincentii |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 189 | ||
| Contigs |
|
||
| Total Sequence Length | 2,121,738 (bp) | ||
| GC Percentage | 27.05 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/810/995/GCA_001810995.1_ASM181099v1 | ||
| CDS | 1950 | ||
| Genes | 2008 | ||
| mRNA | 2008 | ||
| misc RNA | 21 | ||
| rRNA | 3 | ||
| tRNA | 33 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM181099v1 |
| GenBank Assembly Accession | GCA_001810995.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001810995.1 [NCBI] |
| BioSample | SAMN04477591 [NCBI] |
| BioProject | PRJNA299929 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2016-02-06T08:06:00.893 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LTGW01 |
| NCBI TaxID | 1739279 |
| Isolation Source | wound r breast |
| Geo Location | |
