Genome Meta Information: Streptococcus gordonii HMSC062B01 (GCA_001811085.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001811085.1 | ||
| HOMD Taxon-ID | HMT-0622 | ||
| Species Name (in use by HOMD) | Streptococcus gordonii | ||
| Organism Name (as deposited) | HMT-622 Streptococcus gordonii HMSC062B01 | ||
| Strain or Isolate | HMSC062B01 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus gordonii |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 148 | ||
| Contigs |
|
||
| Total Sequence Length | 2,290,184 (bp) | ||
| GC Percentage | 40.41 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/811/085/GCA_001811085.1_ASM181108v1 | ||
| CDS | 2175 | ||
| Genes | 2248 | ||
| mRNA | 2248 | ||
| misc RNA | 31 | ||
| rRNA | 3 | ||
| tRNA | 38 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.81 % | ||
| CheckM Contamination | 0.1 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM181108v1 |
| GenBank Assembly Accession | GCA_001811085.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001811085.1 [NCBI] |
| BioSample | SAMN04477596 [NCBI] |
| BioProject | PRJNA299934 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2016-02-06T08:06:01.067 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LTGS01 |
| NCBI TaxID | 1739284 |
| Isolation Source | sputum |
| Geo Location | |
