Genome Meta Information: Streptococcus parasanguinis HMSC073D05 (GCA_001812015.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001812015.1 | ||
| HOMD Taxon-ID | HMT-0411 | ||
| Species Name (in use by HOMD) | Streptococcus parasanguinis | ||
| Organism Name (as deposited) | HMT-411 Streptococcus parasanguinis HMSC073D05 | ||
| Strain or Isolate | HMSC073D05 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus parasanguinis_D |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 159 | ||
| Contigs |
|
||
| Total Sequence Length | 2,022,881 (bp) | ||
| GC Percentage | 41.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/015/GCA_001812015.1_ASM181201v1 | ||
| CDS | 1891 | ||
| Genes | 1967 | ||
| mRNA | 1967 | ||
| misc RNA | 34 | ||
| rRNA | 4 | ||
| tRNA | 37 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.52 % | ||
| CheckM Contamination | 0.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM181201v1 |
| GenBank Assembly Accession | GCA_001812015.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001812015.1 [NCBI] |
| BioSample | SAMN04477645 [NCBI] |
| BioProject | PRJNA299986 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2016-02-06T08:06:05.690 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LTEZ01 |
| NCBI TaxID | 1739336 |
| Isolation Source | stool |
| Geo Location | |
