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Genome Meta Information:
Rothia mucilaginosa HMSC065B04 (GCA_001812285.1)
| HOMD Genome-ID | GCA_001812285.1 |
| HOMD Taxon-ID | HMT-681 |
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 HMSC065B04 |
| Strain or Isolate | HMSC065B04 |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia mucilaginosa |
| Sequencing Technology | Illumina |
| Genome Coverage | 170.0x |
| Contigs |
|
| Total Sequence Length | 2,319,336 (bp) |
| GC Percentage | 59.53 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/812/285/GCA_001812285.1_ASM181228v1 |
| CDS | 1765 |
| Genes | 1833 |
| mRNA | 1833 |
| misc RNA | 14 |
| rRNA | 7 |
| tRNA | 46 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
Rothia__mucilaginosa__HMT_147_681
Open SVG
|
|
| Genome Assembly Name | ASM181228v1 |
| GenBank Assembly Accession |
GCA_001812285.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_001812285.1
[NCBI]
|
| BioSample |
SAMN04477657
[NCBI]
|
| BioProject |
PRJNA299999
[NCBI]
|
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2016-02-06T08:06:06.110 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | live |
| WGS Project | LTEN01 |
| NCBI TaxID | 1739349 |
| Isolation Source | sputum |
| Geo Location | |
| ANI (Average Nucluotide Identity) | % |
| CheckM Completeness | 99.42 % |
| CheckM Percentile | 100 % |
| CheckM Contamination | 0.73 % |
|
