Genome Meta Information: Corynebacterium hesseae HMSC078C09 (GCA_001814525.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001814525.1 | ||
| HOMD Taxon-ID | HMT-0445 | ||
| Species Name (in use by HOMD) | Corynebacterium hesseae | ||
| Organism Name (as deposited) | HMT-445 Corynebacterium aurimucosum clade-445 HMSC078C09 | ||
| Strain or Isolate | HMSC078C09 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium hesseae |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 104 | ||
| Contigs |
|
||
| Total Sequence Length | 2,669,014 (bp) | ||
| GC Percentage | 61.09 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/814/525/GCA_001814525.1_ASM181452v1 | ||
| CDS | 2467 | ||
| Genes | 2532 | ||
| mRNA | 0 | ||
| misc RNA | 8 | ||
| rRNA | 4 | ||
| tRNA | 52 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.49 % | ||
| CheckM Contamination | 0.41 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM181452v1 |
| GenBank Assembly Accession | GCA_001814525.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001814525.1 [NCBI] |
| BioSample | SAMN04480397 [NCBI] |
| BioProject | PRJNA300128 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2016-02-08T13:05:25.397 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LTUR01 |
| NCBI TaxID | 1739478 |
| Isolation Source | urine |
| Geo Location | |
