Genome Meta Information: Fusobacterium polymorphum HMSC064B11 (GCA_001815715.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001815715.1 | ||
| HOMD Taxon-ID | HMT-0202 | ||
| Species Name (in use by HOMD) | Fusobacterium polymorphum | ||
| Organism Name (as deposited) | HMT-202 Fusobacterium polymorphum HMSC064B11 | ||
| Strain or Isolate | HMSC064B11 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium polymorphum |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 99 | ||
| Contigs |
|
||
| Total Sequence Length | 2,401,628 (bp) | ||
| GC Percentage | 26.97 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/815/715/GCA_001815715.1_ASM181571v1 | ||
| CDS | 2258 | ||
| Genes | 2314 | ||
| mRNA | 2314 | ||
| misc RNA | 25 | ||
| rRNA | 2 | ||
| tRNA | 28 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.29 % | ||
| CheckM Contamination | 0.03 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM181571v1 |
| GenBank Assembly Accession | GCA_001815715.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001815715.1 [NCBI] |
| BioSample | SAMN04480459 [NCBI] |
| BioProject | PRJNA300194 [NCBI] |
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2016-02-08T13:05:27.587 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | LTSL01 |
| NCBI TaxID | 1739543 |
| Isolation Source | blood central line |
| Geo Location | |
