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Genome Meta Information:
Rothia mucilaginosa HMSC061D12 (GCA_001836735.1)
| HOMD Genome-ID | GCA_001836735.1 |
| HOMD Taxon-ID | HMT-681 |
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 HMSC061D12 |
| Strain or Isolate | HMSC061D12 |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia sp001836735 |
| Sequencing Technology | Illumina |
| Genome Coverage | 171.0x |
| Contigs |
|
| Total Sequence Length | 2,336,535 (bp) |
| GC Percentage | 59.69 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/836/735/GCA_001836735.1_ASM183673v1 |
| CDS | 1798 |
| Genes | 1866 |
| mRNA | 1866 |
| misc RNA | 13 |
| rRNA | 6 |
| tRNA | 48 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
Rothia__mucilaginosa__HMT_147_681
Open SVG
|
|
| Genome Assembly Name | ASM183673v1 |
| GenBank Assembly Accession |
GCA_001836735.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_001836735.1
[NCBI]
|
| BioSample |
SAMN04498645
[NCBI]
|
| BioProject |
PRJNA296289
[NCBI]
|
| Submitter | The Genome Institute at Washington University |
| Submission Date | 2016-02-18T16:05:21.937 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | live |
| WGS Project | LTQJ01 |
| NCBI TaxID | 1715161 |
| Isolation Source | sputum |
| Geo Location | |
| ANI (Average Nucluotide Identity) | % |
| CheckM Completeness | 99.42 % |
| CheckM Percentile | 100 % |
| CheckM Contamination | 0.52 % |
|
