Genome Meta Information: Fusobacterium vincentii AB1 (GCA_001854465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_001854465.1 | ||
| HOMD Taxon-ID | HMT-0200 | ||
| Species Name (in use by HOMD) | Fusobacterium vincentii | ||
| Organism Name (as deposited) | HMT-200 Fusobacterium vincentii AB1 | ||
| Strain or Isolate | AB1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium vincentii |
||
| Sequencing Technology | Illumina | ||
| Genome Coverage | 28 | ||
| Contigs |
|
||
| Total Sequence Length | 2,143,397 (bp) | ||
| GC Percentage | 27.0 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/001/854/465/GCA_001854465.1_ASM185446v1 | ||
| CDS | 1946 | ||
| Genes | 2019 | ||
| mRNA | 2019 | ||
| misc RNA | 17 | ||
| rRNA | 10 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.4 % | ||
| CheckM Completeness | 99.57 % | ||
| CheckM Contamination | 0.8 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM185446v1 |
| GenBank Assembly Accession | GCA_001854465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_001854465.1 [NCBI] |
| BioSample | SAMN05912803 [NCBI] |
| BioProject | PRJNA338014 [NCBI] |
| Submitter | UW |
| Submission Date | 2016-10-14T20:16:04.966 |
| Assembly Method | |
| Assembly Level | Scaffold |
| Sequencing Status | |
| WGS Project | MLQO01 |
| NCBI TaxID | 851 |
| Isolation Source | sinus tissue |
| Geo Location | USA: Seattle |
